BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E12LP1|AL427340
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1265 1768 0.0
>3x_Contig1265
Length = 8324
Score = 1768 bits (890), Expect = 0.0
Identities = 939/950 (98%), Gaps = 5/950 (0%)
Strand = Plus / Minus
Query: 1 cgacgttgttaaagtgtcggatgatgaactatttttgaagtctactgacaagcatttaag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 cgacgttgtcaaagtgtcggatgatgaactatttttgaagtctactgacaagcatttaag 1786
Query: 61 tgtattgrtaacattgcaaatcaagaaccacgatgacctgagaaatgaattcagaatagc 120
||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 tgtattggtagcattgctaatcaagaaccacgatgacctgagaaatgaattcagaatagc 1726
Query: 121 caccagtgtggttacctacaatttttttggcagggtgtacatgctgcctgtgtctatggc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 caccagtgtggtcacctacaatttttttggcagggtgtacatgctgcctgtgtctatggc 1666
Query: 181 acatggctttattgttaggtccatgttggataaactcgagcccatttgaaacttatgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 acatggctttattgttaggtccatgttggataaactcgagcccatttgaaacttatgcca 1606
Query: 241 acatatggtaaaaaatatggtggatctgtggtgtttgggcttgcagtcatataacaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 acatatggtaaaaaatatggtggatctgtggtgtttgggcttgcagtcatataacaatta 1546
Query: 301 acatacataatatcatcactattacatctttaaatctcggtcacctataccacctcagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 acatacataatatcatcactattacatctttaaatctcggtcacctataccacctcagaa 1486
Query: 361 aatacagctctagagttgtcagctgataaatgctagctaggaattttgtataatacatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 aatacagctctagagttgtcagctgataaatgctagctaggaattttgtataatacatcg 1426
Query: 421 taatttacaggtaaatttctgcgatgcctgtcaatacttttcaacaaaggcaatgcaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 taatttacaggtaaatttctgcgatgcctgtcaatacttttcaacaaaggcaatgcaaga 1366
Query: 481 taaatcggtatggtcttgaaacctgatattcctgcaataggaacgcatctgattctgccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 taaatcggtatggtcttgaaacctgatattcctgcaataggaacgcatctgattctgccc 1306
Query: 541 tacatgattttccggttaccctagttaaataccaatggggctcatcatgaaatatttcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 tacatgattttccggttaccctagttaaataccaatggggctcatcatgaaatatttcca 1246
Query: 601 tatcacgtgcaaaataatggcattgatttgacatttctaaaaacagaaatagcaggaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 tatcacgtgcaaaataatggcattgatttgacatttctaaaaacagaaatagcaggaaac 1186
Query: 661 caacccacagagtttatacttaatgataactgaagccctcttctgttgtgagawattcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1185 caacccacagagtttatacttaatgataactgaagccctcttctgttgtgagatattcaa 1126
Query: 721 taattaataaacagtggcatttgaaatttagacagaagataccaatagtaagcaattggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 taattaataaacagtggcatttgaaatttagacagaagataccaatagtaagcaattggt 1066
Query: 781 atctgacgaggaaaacaattattcagcgttctttcacctatcctcggatattctgctatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 atctgacgaggaaaacaattattcagcgttctttcacctatcctcggatattctgctatt 1006
Query: 841 tattacaccaaatcaggctgctaagttcacttccggggtctaagt-cttattattatatt 899
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1005 tattacaccaaatcaggctgctaagttcacttccggggtctaagtccttattattatatt 946
Query: 900 ta-ctccatcgctaggg-aatcataatgaaga-tagtccg-tgtacagct 945
|| |||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 945 tacctccatcgctagggaaatcataatgaagattagtccgttgtacagct 896
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7050
Number of Sequences: 1807
Number of extensions: 7050
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)